Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file: parameterchecks.html
| Parameter | Value | Phase | Min | Max | Init | Status | Parm_StDev | Gradient | Pr_type | Prior | Pr_SD | Pr_Like | Afterbound |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SD_young_Fem_GP_1 | 4.388110 | 1 | 0.1 | 10 | 4.360770 | OK | 0.3408100 | 2.4101e-07 | No_prior | NA | NA | NA | OK |
| SR_LN(R0) | 14.105000 | 1 | 3.0 | 80 | 14.000000 | OK | 0.2956280 | -1.06207e-05 | No_prior | NA | NA | NA | OK |
| SR_regime_BLK1add_36 | 0.808612 | 2 | -5.0 | 5 | 0.891045 | OK | 0.3797380 | -1.07477e-07 | Normal | 0 | 2.5 | 0.0523082 | OK |
| InitF_seas_1_flt_19F19.DEL.C.inshore | 0.153673 | 2 | 0.0 | 5 | 0.129078 | OK | 0.0981463 | -7.07066e-08 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_F19.DEL.C.inshore(19) | 99.909200 | 4 | 20.0 | 199 | 97.112400 | OK | 1.8284400 | 6.08802e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_top_logit_F19.DEL.C.inshore(19) | -0.487632 | 5 | -15.0 | 15 | -0.557971 | OK | 0.1225820 | 5.90875e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19) | 6.546650 | 3 | -5.0 | 15 | 6.459960 | OK | 0.0731912 | 1.4945e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_descend_se_F19.DEL.C.inshore(19) | 5.651430 | 3 | -15.0 | 15 | 5.804510 | OK | 0.2722910 | 3.62303e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_end_logit_F19.DEL.C.inshore(19) | -4.961750 | 3 | -15.0 | 15 | -5.440940 | OK | 2.0364100 | 1.59521e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_S1.PS_VAST(33) | 97.415600 | 4 | 20.0 | 199 | 95.253700 | OK | 0.9274040 | -7.40921e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_top_logit_S1.PS_VAST(33) | -0.689480 | 5 | -15.0 | 15 | -0.723796 | OK | 0.0596818 | 5.37416e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_S1.PS_VAST(33) | 6.421660 | 3 | -5.0 | 15 | 6.357060 | OK | 0.0338694 | 1.87241e-05 | No_prior | NA | NA | NA | OK |
| Size_DblN_descend_se_S1.PS_VAST(33) | 5.911060 | 3 | -15.0 | 15 | 6.020650 | OK | 0.1237760 | 3.79665e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_end_logit_S1.PS_VAST(33) | -4.512230 | 3 | -15.0 | 15 | -4.856460 | OK | 0.5473120 | 3.3582e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 | 91.703200 | 4 | 20.0 | 199 | 89.749800 | OK | 1.2725500 | -1.30788e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 | 87.054700 | 4 | 20.0 | 199 | 83.338100 | OK | 3.1677600 | -6.60613e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | -0.446087 | 5 | -15.0 | 15 | -0.469518 | OK | 0.0908402 | -2.85724e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | -1.418990 | 5 | -15.0 | 15 | -1.301780 | OK | 0.4124960 | -1.59297e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | 6.291380 | 3 | -5.0 | 15 | 6.225460 | OK | 0.0589492 | 3.11671e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | 6.038800 | 3 | -5.0 | 15 | 5.871930 | OK | 0.1729190 | 1.09558e-06 | No_prior | NA | NA | NA | OK |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | 5.586330 | 3 | -5.0 | 15 | 5.682690 | OK | 0.2028460 | -2.57549e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | 6.739460 | 3 | -5.0 | 15 | 6.870040 | OK | 0.3084410 | -1.18758e-07 | No_prior | NA | NA | NA | OK |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | -4.999090 | 5 | -5.0 | 15 | -4.999290 | LO | 0.0319033 | -1.00733e-07 | No_prior | NA | NA | NA | CHECK |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | -4.997010 | 5 | -5.0 | 15 | -4.995010 | LO | 0.0976687 | 3.03651e-08 | No_prior | NA | NA | NA | OK |
Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html
| label.i | label.j | corr |
|---|---|---|
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 | 0.958063 |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19) | Size_DblN_peak_F19.DEL.C.inshore(19) | 0.949922 |
| Size_DblN_ascend_se_S1.PS_VAST(33) | Size_DblN_peak_S1.PS_VAST(33) | 0.948225 |
| Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 | 0.946548 |
| Early_InitAge_4 | SR_regime_BLK1add_36 | -0.921139 |
| Early_InitAge_1 | SR_regime_BLK1add_36 | -0.892039 |
| Early_InitAge_2 | SR_regime_BLK1add_36 | -0.886508 |
| Size_DblN_descend_se_S1.PS_VAST(33) | Size_DblN_top_logit_S1.PS_VAST(33) | -0.877197 |
| Early_InitAge_2 | Early_InitAge_4 | 0.877088 |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 | Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | -0.876382 |
| Early_InitAge_3 | SR_regime_BLK1add_36 | -0.845533 |
| Size_DblN_descend_se_F19.DEL.C.inshore(19) | Size_DblN_top_logit_F19.DEL.C.inshore(19) | -0.833527 |
| Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 | Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | -0.824423 |
| Early_InitAge_1 | Early_InitAge_3 | 0.822423 |
| Early_InitAge_1 | Early_InitAge_4 | 0.811437 |
| Size_DblN_peak_S1.PS_VAST(33) | SR_LN(R0) | -0.810664 |
| Early_InitAge_7 | SR_regime_BLK1add_36 | -0.792683 |
| Early_InitAge_5 | SR_regime_BLK1add_36 | -0.753648 |
| Early_InitAge_3 | Early_InitAge_5 | 0.746883 |
| Early_InitAge_4 | Early_InitAge_7 | 0.72692 |
| Early_InitAge_1 | Early_InitAge_7 | 0.716725 |
| Early_InitAge_5 | Early_InitAge_7 | 0.711223 |
| Early_InitAge_2 | Early_InitAge_7 | 0.709609 |
| Early_InitAge_1 | Early_InitAge_5 | 0.693875 |
| Early_InitAge_3 | Early_InitAge_7 | 0.690535 |
| Early_InitAge_1 | Early_InitAge_2 | 0.685852 |
| Size_DblN_end_logit_S1.PS_VAST(33) | Size_DblN_descend_se_S1.PS_VAST(33) | -0.674082 |
| Early_InitAge_3 | Early_InitAge_4 | 0.663532 |
| InitF_seas_1_flt_19F19.DEL.C.inshore | SR_regime_BLK1add_36 | 0.660389 |
| Size_DblN_ascend_se_S1.PS_VAST(33) | SR_LN(R0) | -0.657916 |
| Early_InitAge_2 | Early_InitAge_5 | 0.636901 |
| Main_RecrDev_129 | Main_RecrDev_128 | -0.628326 |
| Main_RecrDev_173 | Main_RecrDev_172 | -0.616153 |
| Main_RecrDev_53 | Main_RecrDev_52 | -0.615896 |
| Main_RecrDev_78 | Main_RecrDev_77 | -0.61536 |
| InitF_seas_1_flt_19F19.DEL.C.inshore | Early_InitAge_4 | -0.611865 |
| Main_RecrDev_79 | Main_RecrDev_78 | -0.608597 |
| Early_InitAge_2 | Early_InitAge_3 | 0.608253 |
| Main_RecrDev_130 | Main_RecrDev_129 | -0.607392 |
| Early_InitAge_4 | Early_InitAge_6 | 0.607012 |
| Main_RecrDev_96 | Main_RecrDev_95 | -0.605626 |
| Main_RecrDev_176 | Main_RecrDev_175 | -0.605132 |
| Main_RecrDev_40 | Main_RecrDev_39 | -0.604708 |
| Main_RecrDev_177 | Main_RecrDev_176 | -0.604127 |
| Main_RecrDev_178 | Main_RecrDev_177 | -0.601219 |
| Main_RecrDev_137 | Main_RecrDev_136 | -0.60017 |
| Main_RecrDev_182 | Main_RecrDev_181 | -0.598651 |
| Main_RecrDev_57 | Main_RecrDev_56 | -0.598027 |
| Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 | -0.597388 |
| Main_RecrDev_101 | Main_RecrDev_100 | -0.594321 |
Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html
| Parameter | max_correlation |
|---|---|
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 | 0.0105276 |
| Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 | 0.0158296 |
| Main_RecrDev_195 | 0.0677958 |
| Main_RecrDev_196 | 0.0689237 |
| Early_InitAge_15 | 0.0830026 |
| Main_RecrDev_194 | 0.0903469 |
| Early_InitAge_14 | 0.107608 |
| Early_InitAge_13 | 0.159902 |
| Early_InitAge_12 | 0.207552 |
| Early_InitAge_8 | 0.299906 |
| Early_InitAge_11 | 0.305802 |
| Early_InitAge_10 | 0.305802 |
| SD_young_Fem_GP_1 | 0.311521 |
| Early_InitAge_9 | 0.345584 |
| Main_RecrDev_188 | 0.348086 |
| Main_RecrDev_189 | 0.348086 |
| Main_RecrDev_192 | 0.348795 |
| Main_RecrDev_193 | 0.348795 |
| Main_RecrDev_187 | 0.359217 |
| Main_RecrDev_190 | 0.380772 |
| Main_RecrDev_191 | 0.380772 |
| Main_RecrDev_37 | 0.39984 |
| Main_RecrDev_147 | 0.41333 |
| Main_RecrDev_66 | 0.439803 |
| Main_RecrDev_148 | 0.441679 |
| Main_RecrDev_65 | 0.452717 |
| Main_RecrDev_67 | 0.463687 |
| Main_RecrDev_68 | 0.463687 |
| Main_RecrDev_186 | 0.466058 |
| Main_RecrDev_119 | 0.471978 |
| Main_RecrDev_38 | 0.483259 |
| Main_RecrDev_117 | 0.490495 |
| Main_RecrDev_118 | 0.490495 |
| Main_RecrDev_120 | 0.495495 |
| Main_RecrDev_59 | 0.502485 |
| Main_RecrDev_69 | 0.503442 |
| Main_RecrDev_70 | 0.503442 |
| Main_RecrDev_116 | 0.511929 |
| Main_RecrDev_185 | 0.513118 |
| Main_RecrDev_146 | 0.514844 |
| Main_RecrDev_151 | 0.516824 |
| Main_RecrDev_60 | 0.517343 |
| Main_RecrDev_168 | 0.52029 |
| Main_RecrDev_64 | 0.522357 |
| Main_RecrDev_44 | 0.524074 |
| Main_RecrDev_55 | 0.524261 |
| Main_RecrDev_149 | 0.527645 |
| Main_RecrDev_150 | 0.527645 |
| Main_RecrDev_165 | 0.528505 |
| Main_RecrDev_86 | 0.530476 |