DiagnosticTables

Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file:
parameterchecks.html

Parameter Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
Linf_Fem_GP_1 151.729000 3 40.0 250 171.460000 OK 0.5640360 0.000209359 No_prior NA NA NA OK
SD_young_Fem_GP_1 4.287760 1 0.1 10 4.600000 OK 0.3708840 2.81098e-06 No_prior NA NA NA OK
SR_LN(R0) 13.552800 1 3.0 80 14.000000 OK 0.0222355 -0.000226493 No_prior NA NA NA OK
SR_regime_BLK1add_36 0.324422 2 -5.0 5 -0.169966 OK 0.3646930 -8.46966e-05 Normal 0 2.5 0.00842 OK
InitF_seas_1_flt_19F19.DEL.C.inshore 0.260973 2 0.0 5 0.572327 OK 0.0841576 3.16989e-05 No_prior NA NA NA OK
Size_DblN_peak_F19.DEL.C.inshore(19) 107.806000 3 20.0 199 100.699000 OK 1.7784500 -7.28567e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_F19.DEL.C.inshore(19) 6.739850 3 -5.0 15 6.667530 OK 0.0642193 0.000154606 No_prior NA NA NA OK
Size_DblN_peak_S1.PS_VAST(33) 102.144000 3 20.0 199 111.338000 OK 0.6984160 -0.000264947 No_prior NA NA NA OK
Size_DblN_ascend_se_S1.PS_VAST(33) 6.531240 3 -5.0 15 6.778810 OK 0.0262442 0.000463457 No_prior NA NA NA OK
Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 97.311100 4 20.0 199 118.284000 OK 1.1961700 -0.000129661 No_prior NA NA NA OK
Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 94.791100 4 20.0 199 97.696300 OK 2.5810100 0.000124336 No_prior NA NA NA OK
Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 -0.403991 5 -15.0 15 3.298390 OK 0.1781980 0.000338612 No_prior NA NA NA OK
Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 -1.333120 5 -15.0 15 -1.177340 OK 0.5801330 0.000145812 No_prior NA NA NA OK
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 6.458910 3 -5.0 15 7.064780 OK 0.0516515 0.000290846 No_prior NA NA NA OK
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 6.304090 3 -5.0 15 6.384350 OK 0.1220070 -0.000136947 No_prior NA NA NA OK
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 3.502140 3 -5.0 15 4.989830 OK 2.0248700 1.63085e-06 No_prior NA NA NA OK
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 5.650420 3 -5.0 15 -4.977450 OK 1.4488400 5.21061e-05 No_prior NA NA NA OK
Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_36 0.244853 5 -5.0 15 5.853370 OK 0.3734130 -5.82986e-05 No_prior NA NA NA OK
Size_DblN_end_logit_F19.DEL.C.inshore(19)_BLK2repl_111 -0.320540 5 -5.0 15 0.401488 OK 0.6433110 2.69825e-05 No_prior NA NA NA OK

Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html

label.i label.j corr
Size_DblN_ascend_se_F19.DEL.C.inshore(19) Size_DblN_peak_F19.DEL.C.inshore(19) 0.957035
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_36 Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_36 0.952195
Size_DblN_ascend_se_F19.DEL.C.inshore(19)_BLK2repl_111 Size_DblN_peak_F19.DEL.C.inshore(19)_BLK2repl_111 0.94436
Size_DblN_ascend_se_S1.PS_VAST(33) Size_DblN_peak_S1.PS_VAST(33) 0.944126
Early_InitAge_4 SR_regime_BLK1add_36 -0.916462
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_36 Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_36 -0.900416
Early_InitAge_1 SR_regime_BLK1add_36 -0.871327
Early_InitAge_2 SR_regime_BLK1add_36 -0.87004
Early_InitAge_2 Early_InitAge_4 0.858613
Early_InitAge_7 SR_regime_BLK1add_36 -0.800499
Size_DblN_descend_se_F19.DEL.C.inshore(19)_BLK2repl_111 Size_DblN_top_logit_F19.DEL.C.inshore(19)_BLK2repl_111 -0.787195
Early_InitAge_1 Early_InitAge_4 0.779294
Early_InitAge_3 SR_regime_BLK1add_36 -0.774894
Early_InitAge_1 Early_InitAge_3 0.753234
Early_InitAge_4 Early_InitAge_7 0.723323
Early_InitAge_5 SR_regime_BLK1add_36 -0.703884
Early_InitAge_1 Early_InitAge_7 0.699151
Early_InitAge_2 Early_InitAge_7 0.697921
Main_RecrDev_129 Main_RecrDev_128 -0.688739
InitF_seas_1_flt_19F19.DEL.C.inshore SR_regime_BLK1add_36 0.6818
Early_InitAge_3 Early_InitAge_5 0.681721
Main_RecrDev_128 Main_RecrDev_127 -0.678348
Main_RecrDev_181 Main_RecrDev_180 -0.672889
Main_RecrDev_180 Main_RecrDev_179 -0.671415
Main_RecrDev_176 Main_RecrDev_175 -0.66468
Main_RecrDev_175 Main_RecrDev_174 -0.659332
Main_RecrDev_172 Main_RecrDev_171 -0.658769
Early_InitAge_5 Early_InitAge_7 0.655588
Main_RecrDev_95 Main_RecrDev_94 -0.654986
Main_RecrDev_76 Main_RecrDev_75 -0.652847
Main_RecrDev_98 Main_RecrDev_97 -0.652581
Main_RecrDev_77 Main_RecrDev_76 -0.651775
Main_RecrDev_97 Main_RecrDev_96 -0.651185
Main_RecrDev_75 Main_RecrDev_74 -0.648485
Main_RecrDev_113 Main_RecrDev_112 -0.648284
Main_RecrDev_78 Main_RecrDev_77 -0.647958
Main_RecrDev_179 Main_RecrDev_178 -0.647434
Main_RecrDev_177 Main_RecrDev_176 -0.647205
Main_RecrDev_96 Main_RecrDev_95 -0.64587
Main_RecrDev_173 Main_RecrDev_172 -0.645787
Main_RecrDev_182 Main_RecrDev_181 -0.643965
Main_RecrDev_53 Main_RecrDev_52 -0.641659
Main_RecrDev_51 Main_RecrDev_50 -0.640388
Main_RecrDev_57 Main_RecrDev_56 -0.639005
Main_RecrDev_136 Main_RecrDev_135 -0.638625
Main_RecrDev_141 Main_RecrDev_140 -0.637488
Main_RecrDev_105 Main_RecrDev_104 -0.637007
Main_RecrDev_79 Main_RecrDev_78 -0.63391
Main_RecrDev_127 Main_RecrDev_126 -0.633247
Main_RecrDev_171 Main_RecrDev_170 -0.63305

Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html

Parameter max_correlation
Early_InitAge_15 0.155615
Early_InitAge_14 0.199588
Early_InitAge_13 0.236383
Main_RecrDev_194 0.236848
Early_InitAge_12 0.242232
Main_RecrDev_195 0.27361
Early_InitAge_8 0.276421
Main_RecrDev_196 0.281957
Early_InitAge_11 0.2856
Early_InitAge_10 0.2856
Early_InitAge_9 0.332103
Main_RecrDev_192 0.364956
Main_RecrDev_193 0.364956
SD_young_Fem_GP_1 0.382923
Main_RecrDev_189 0.388348
Main_RecrDev_68 0.419128
Main_RecrDev_190 0.420972
Main_RecrDev_191 0.420972
Main_RecrDev_148 0.427067
Linf_Fem_GP_1 0.446779
SR_LN(R0) 0.446779
Main_RecrDev_37 0.465653
Main_RecrDev_188 0.481541
Main_RecrDev_187 0.508605
Main_RecrDev_119 0.515193
Main_RecrDev_118 0.521685
Main_RecrDev_67 0.522435
Early_InitAge_6 0.537233
Main_RecrDev_101 0.540969
Main_RecrDev_66 0.541886
Main_RecrDev_146 0.547791
Main_RecrDev_147 0.547791
Main_RecrDev_38 0.54828
Main_RecrDev_45 0.557206
Main_RecrDev_117 0.557658
Main_RecrDev_44 0.559506
Main_RecrDev_125 0.564123
Main_RecrDev_149 0.566203
Main_RecrDev_145 0.568214
Main_RecrDev_133 0.574812
Main_RecrDev_65 0.578373
Main_RecrDev_46 0.578593
Main_RecrDev_109 0.58138
Main_RecrDev_110 0.58138
Main_RecrDev_58 0.585291
Main_RecrDev_167 0.586183
Main_RecrDev_164 0.588601
Main_RecrDev_59 0.589331
Main_RecrDev_41 0.589661
Main_RecrDev_42 0.59422